Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.04■□□□□ 0.8
CNGA1P29973 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNGA1P29973 GMCL1P1-201ENST00000463439 1581 ntBASIC20.04■□□□□ 0.8
CNGA1P29973 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.04■□□□□ 0.8
CNGA1P29973 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.03■□□□□ 0.8
CNGA1P29973 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CNGA1P29973 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CNGA1P29973 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CNGA1P29973 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CNGA1P29973 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.03■□□□□ 0.8
CNGA1P29973 ALG1L5P-201ENST00000482043 771 ntBASIC20.03■□□□□ 0.8
CNGA1P29973 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.03■□□□□ 0.8
CNGA1P29973 MIR4751-201ENST00000578027 74 ntBASIC20.03■□□□□ 0.8
CNGA1P29973 AC010460.3-201ENST00000511359 1579 ntBASIC20.03■□□□□ 0.8
CNGA1P29973 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNGA1P29973 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.02■□□□□ 0.8
CNGA1P29973 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.02■□□□□ 0.8
CNGA1P29973 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.02■□□□□ 0.8
CNGA1P29973 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.02■□□□□ 0.8
CNGA1P29973 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.02■□□□□ 0.8
CNGA1P29973 PRYP5-201ENST00000451909 266 ntBASIC20.02■□□□□ 0.8
CNGA1P29973 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.02■□□□□ 0.8
CNGA1P29973 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.02■□□□□ 0.8
CNGA1P29973 AC073592.4-201ENST00000623827 446 ntBASIC20.02■□□□□ 0.8
CNGA1P29973 AC092865.6-201ENST00000642101 219 ntBASIC20.02■□□□□ 0.8
CNGA1P29973 AC002310.6-201ENST00000624451 1377 ntBASIC20.02■□□□□ 0.8
CNGA1P29973 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.02■□□□□ 0.8
CNGA1P29973 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.02■□□□□ 0.8
CNGA1P29973 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNGA1P29973 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CNGA1P29973 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNGA1P29973 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CNGA1P29973 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.02■□□□□ 0.79
CNGA1P29973 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.02■□□□□ 0.79
CNGA1P29973 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.01■□□□□ 0.79
CNGA1P29973 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.01■□□□□ 0.79
CNGA1P29973 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNGA1P29973 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.01■□□□□ 0.79
CNGA1P29973 HTR5BP-201ENST00000430851 1154 ntBASIC20.01■□□□□ 0.79
CNGA1P29973 CYMP-203ENST00000474680 1263 ntBASIC20.01■□□□□ 0.79
CNGA1P29973 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 AC018845.2-201ENST00000568326 409 ntBASIC20.01■□□□□ 0.79
CNGA1P29973 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.01■□□□□ 0.79
CNGA1P29973 AD001527.2-201ENST00000622994 785 ntBASIC20.01■□□□□ 0.79
CNGA1P29973 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 BCL2-203ENST00000589955 5011 ntBASIC20.01■□□□□ 0.79
CNGA1P29973 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
CNGA1P29973 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.01■□□□□ 0.79
CNGA1P29973 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNGA1P29973 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 AC132938.6-201ENST00000623828 1655 ntBASIC20■□□□□ 0.79
CNGA1P29973 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CNGA1P29973 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNGA1P29973 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms