Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC116407.4-201ENST00000623319 1061 ntBASIC16.75■□□□□ 0.27
PTPN6P29350 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.75■□□□□ 0.27
PTPN6P29350 IER3-202ENST00000376377 1350 ntBASIC16.75■□□□□ 0.27
PTPN6P29350 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PTPN6P29350 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN6P29350 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN6P29350 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN6P29350 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PTPN6P29350 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PTPN6P29350 AC005104.2-201ENST00000427818 678 ntBASIC16.74■□□□□ 0.27
PTPN6P29350 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN6P29350 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN6P29350 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
PTPN6P29350 AC004263.2-201ENST00000617183 678 ntBASIC16.74■□□□□ 0.27
PTPN6P29350 AC009154.2-201ENST00000621177 724 ntBASIC16.74■□□□□ 0.27
PTPN6P29350 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PTPN6P29350 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN6P29350 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN6P29350 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN6P29350 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN6P29350 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN6P29350 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN6P29350 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN6P29350 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN6P29350 AL645929.1-201ENST00000420084 975 ntBASIC16.73■□□□□ 0.27
PTPN6P29350 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.73■□□□□ 0.27
PTPN6P29350 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN6P29350 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN6P29350 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN6P29350 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN6P29350 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN6P29350 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN6P29350 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN6P29350 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN6P29350 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN6P29350 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN6P29350 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN6P29350 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN6P29350 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms