Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CTGFP29279 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTGFP29279 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTGFP29279 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.71■□□□□ 0.75
CTGFP29279 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.71■□□□□ 0.75
CTGFP29279 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.71■□□□□ 0.75
CTGFP29279 SLC25A39P2-201ENST00000537614 270 ntBASIC19.71■□□□□ 0.75
CTGFP29279 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.71■□□□□ 0.75
CTGFP29279 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.71■□□□□ 0.75
CTGFP29279 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.71■□□□□ 0.75
CTGFP29279 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.71■□□□□ 0.75
CTGFP29279 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.71■□□□□ 0.75
CTGFP29279 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.71■□□□□ 0.75
CTGFP29279 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.71■□□□□ 0.75
CTGFP29279 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTGFP29279 AC008677.1-201ENST00000519230 1561 ntBASIC19.7■□□□□ 0.74
CTGFP29279 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 AC107890.1-201ENST00000422478 521 ntBASIC19.7■□□□□ 0.74
CTGFP29279 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.7■□□□□ 0.74
CTGFP29279 FAM86C2P-203ENST00000528684 1004 ntBASIC19.7■□□□□ 0.74
CTGFP29279 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.7■□□□□ 0.74
CTGFP29279 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.7■□□□□ 0.74
CTGFP29279 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.7■□□□□ 0.74
CTGFP29279 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CTGFP29279 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.7■□□□□ 0.74
CTGFP29279 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CTGFP29279 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.7■□□□□ 0.74
CTGFP29279 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTGFP29279 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
CTGFP29279 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CTGFP29279 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.69■□□□□ 0.74
CTGFP29279 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.69■□□□□ 0.74
CTGFP29279 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.69■□□□□ 0.74
CTGFP29279 RBPMS2P1-201ENST00000437762 623 ntBASIC19.69■□□□□ 0.74
CTGFP29279 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 AC002558.1-201ENST00000488906 803 ntBASIC19.69■□□□□ 0.74
CTGFP29279 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.69■□□□□ 0.74
CTGFP29279 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.69■□□□□ 0.74
CTGFP29279 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.69■□□□□ 0.74
CTGFP29279 DUX4L17-201ENST00000557360 1267 ntBASIC19.69■□□□□ 0.74
CTGFP29279 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 AL135744.1-201ENST00000565098 629 ntBASIC19.69■□□□□ 0.74
CTGFP29279 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.69■□□□□ 0.74
CTGFP29279 AL390754.1-201ENST00000619088 582 ntBASIC19.69■□□□□ 0.74
CTGFP29279 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.69■□□□□ 0.74
CTGFP29279 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CTGFP29279 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTGFP29279 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.69■□□□□ 0.74
CTGFP29279 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTGFP29279 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.68■□□□□ 0.74
CTGFP29279 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.68■□□□□ 0.74
CTGFP29279 SPCS2P4-201ENST00000436160 681 ntBASIC19.68■□□□□ 0.74
CTGFP29279 FAM207CP-201ENST00000443486 507 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms