Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 ATP5G2P1-201ENST00000433580 426 ntBASIC16.92■□□□□ 0.3
HTR1EP28566 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.92■□□□□ 0.3
HTR1EP28566 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 AC104390.1-201ENST00000555663 520 ntBASIC16.92■□□□□ 0.3
HTR1EP28566 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HTR1EP28566 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.92■□□□□ 0.3
HTR1EP28566 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTR1EP28566 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR1EP28566 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HTR1EP28566 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
HTR1EP28566 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HTR1EP28566 LINC01311-201ENST00000565162 1445 ntBASIC16.91■□□□□ 0.3
HTR1EP28566 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.91■□□□□ 0.3
HTR1EP28566 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.91■□□□□ 0.3
HTR1EP28566 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.91■□□□□ 0.3
HTR1EP28566 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 AC083849.1-201ENST00000615227 514 ntBASIC16.91■□□□□ 0.3
HTR1EP28566 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 LINC01451-201ENST00000623792 534 ntBASIC16.91■□□□□ 0.3
HTR1EP28566 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR1EP28566 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HTR1EP28566 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTR1EP28566 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.91■□□□□ 0.3
HTR1EP28566 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR1EP28566 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HTR1EP28566 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HTR1EP28566 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HTR1EP28566 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.9■□□□□ 0.3
HTR1EP28566 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.9■□□□□ 0.3
HTR1EP28566 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.9■□□□□ 0.3
HTR1EP28566 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HTR1EP28566 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.9■□□□□ 0.3
HTR1EP28566 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
HTR1EP28566 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HTR1EP28566 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTR1EP28566 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HTR1EP28566 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HTR1EP28566 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
HTR1EP28566 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.89■□□□□ 0.29
HTR1EP28566 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTR1EP28566 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HTR1EP28566 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms