Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.21■■□□□ 1.15
PDE4AP27815 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PDE4AP27815 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 LTF-203ENST00000426532 2494 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE4AP27815 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.21■■□□□ 1.15
PDE4AP27815 KRT8P47-201ENST00000604727 1398 ntBASIC22.21■■□□□ 1.15
PDE4AP27815 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.21■■□□□ 1.15
PDE4AP27815 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PDE4AP27815 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
PDE4AP27815 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PDE4AP27815 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC22.2■■□□□ 1.15
PDE4AP27815 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PDE4AP27815 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PDE4AP27815 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
PDE4AP27815 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 FLJ38576-201ENST00000623820 2459 ntBASIC22.2■■□□□ 1.14
PDE4AP27815 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE4AP27815 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE4AP27815 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PDE4AP27815 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.2■■□□□ 1.14
PDE4AP27815 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE4AP27815 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE4AP27815 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE4AP27815 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.2■■□□□ 1.14
PDE4AP27815 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE4AP27815 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 AL391807.1-203ENST00000604392 2365 ntBASIC22.2■■□□□ 1.14
PDE4AP27815 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC22.2■■□□□ 1.14
PDE4AP27815 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PDE4AP27815 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.2■■□□□ 1.14
PDE4AP27815 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDE4AP27815 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PDE4AP27815 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.19■■□□□ 1.14
PDE4AP27815 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.19■■□□□ 1.14
PDE4AP27815 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 REXO1L11P-201ENST00000620964 1927 ntBASIC22.19■■□□□ 1.14
PDE4AP27815 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PDE4AP27815 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDE4AP27815 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC22.18■■□□□ 1.14
PDE4AP27815 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
PDE4AP27815 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 AC009949.1-201ENST00000623048 1830 ntBASIC22.18■■□□□ 1.14
PDE4AP27815 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PDE4AP27815 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.18■■□□□ 1.14
PDE4AP27815 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.18■■□□□ 1.14
PDE4AP27815 AC113404.2-201ENST00000507884 177 ntBASIC22.18■■□□□ 1.14
PDE4AP27815 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.18■■□□□ 1.14
PDE4AP27815 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.18■■□□□ 1.14
PDE4AP27815 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PDE4AP27815 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDE4AP27815 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PDE4AP27815 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PDE4AP27815 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDE4AP27815 AC073508.3-201ENST00000619697 1419 ntBASIC22.17■■□□□ 1.14
PDE4AP27815 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC22.17■■□□□ 1.14
PDE4AP27815 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDE4AP27815 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms