Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL8A2P25067 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
COL8A2P25067 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COL8A2P25067 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 AL022342.1-201ENST00000400363 863 ntBASIC14.9□□□□□ -0.02
COL8A2P25067 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 AC103564.2-201ENST00000432853 1299 ntBASIC14.9□□□□□ -0.02
COL8A2P25067 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 AC120114.3-201ENST00000611923 658 ntBASIC14.9□□□□□ -0.02
COL8A2P25067 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 BX640515.1-201ENST00000617215 977 ntBASIC14.9□□□□□ -0.02
COL8A2P25067 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 AD001527.2-201ENST00000622994 785 ntBASIC14.9□□□□□ -0.02
COL8A2P25067 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.9□□□□□ -0.02
COL8A2P25067 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
COL8A2P25067 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL8A2P25067 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL8A2P25067 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COL8A2P25067 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
COL8A2P25067 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
COL8A2P25067 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.89□□□□□ -0.03
COL8A2P25067 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 RPS2P1-201ENST00000434010 821 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.89□□□□□ -0.03
COL8A2P25067 AC093909.1-201ENST00000504731 1122 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.89□□□□□ -0.03
COL8A2P25067 AC116407.2-201ENST00000613639 860 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 FAM215A-202ENST00000632077 792 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
COL8A2P25067 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 PMPCAP1-201ENST00000508114 1576 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
COL8A2P25067 IL9RP2-201ENST00000423948 1312 ntBASIC14.89□□□□□ -0.03
COL8A2P25067 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL8A2P25067 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms