Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL4P13236 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCL4P13236 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.58■□□□□ 0.24
CCL4P13236 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CCL4P13236 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.58■□□□□ 0.24
CCL4P13236 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.58■□□□□ 0.24
CCL4P13236 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.58■□□□□ 0.24
CCL4P13236 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.58■□□□□ 0.24
CCL4P13236 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.58■□□□□ 0.24
CCL4P13236 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.58■□□□□ 0.24
CCL4P13236 AC010654.1-201ENST00000615722 808 ntBASIC16.58■□□□□ 0.24
CCL4P13236 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.58■□□□□ 0.24
CCL4P13236 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCL4P13236 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.58■□□□□ 0.24
CCL4P13236 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCL4P13236 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.58■□□□□ 0.24
CCL4P13236 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.58■□□□□ 0.24
CCL4P13236 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCL4P13236 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCL4P13236 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCL4P13236 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 METTL21AP1-201ENST00000438852 635 ntBASIC16.57■□□□□ 0.24
CCL4P13236 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.57■□□□□ 0.24
CCL4P13236 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.57■□□□□ 0.24
CCL4P13236 OR7E47P-204ENST00000575924 449 ntBASIC16.57■□□□□ 0.24
CCL4P13236 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.57■□□□□ 0.24
CCL4P13236 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.57■□□□□ 0.24
CCL4P13236 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.57■□□□□ 0.24
CCL4P13236 AC004877.2-201ENST00000623941 599 ntBASIC16.57■□□□□ 0.24
CCL4P13236 AC010507.1-201ENST00000633895 436 ntBASIC16.57■□□□□ 0.24
CCL4P13236 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCL4P13236 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.57■□□□□ 0.24
CCL4P13236 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCL4P13236 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCL4P13236 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CCL4P13236 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.56■□□□□ 0.24
CCL4P13236 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL4P13236 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL4P13236 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.56■□□□□ 0.24
CCL4P13236 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCL4P13236 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.56■□□□□ 0.24
CCL4P13236 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCL4P13236 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCL4P13236 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 BCAR1-209ENST00000546196 1340 ntBASIC16.55■□□□□ 0.24
CCL4P13236 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCL4P13236 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCL4P13236 AP002414.1-201ENST00000391405 1147 ntBASIC16.55■□□□□ 0.24
CCL4P13236 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms