Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 AC098831.1-202ENST00000438821 336 ntBASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 AC092910.1-201ENST00000482027 1129 ntBASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40ALP0C0E4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 KRT18P13-201ENST00000400056 1290 ntBASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 POLD2P1-201ENST00000511220 997 ntBASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 AC012640.2-201ENST00000561606 901 ntBASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 AC068880.1-201ENST00000507289 2297 ntBASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 AP000997.3-201ENST00000623333 2250 ntBASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40ALP0C0E4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AL591424.1-201ENST00000442569 1213 ntBASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AC027601.4-201ENST00000611259 610 ntBASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 FAM197Y3-203ENST00000618346 717 ntBASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 AC104109.2-201ENST00000602919 1418 ntBASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40ALP0C0E4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 SPDYE21P-201ENST00000413323 827 ntBASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 BX005266.1-201ENST00000473402 457 ntBASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB40ALP0C0E4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms