Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CSF1P09603 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 LINC00304-203ENST00000565008 1864 ntBASIC15.29■□□□□ 0.04
CSF1P09603 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.29■□□□□ 0.04
CSF1P09603 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.29■□□□□ 0.04
CSF1P09603 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 AC004980.1-204ENST00000429707 299 ntBASIC15.29■□□□□ 0.04
CSF1P09603 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.29■□□□□ 0.04
CSF1P09603 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 C2orf69P3-201ENST00000565542 1120 ntBASIC15.29■□□□□ 0.04
CSF1P09603 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 AC010947.1-201ENST00000623454 693 ntBASIC15.29■□□□□ 0.04
CSF1P09603 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.29■□□□□ 0.04
CSF1P09603 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.29■□□□□ 0.04
CSF1P09603 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSF1P09603 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
CSF1P09603 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.29■□□□□ 0.04
CSF1P09603 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CSF1P09603 AC099343.3-201ENST00000605834 2503 ntBASIC15.28■□□□□ 0.04
CSF1P09603 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 PCDHA14-201ENST00000506751 2298 ntBASIC15.28■□□□□ 0.04
CSF1P09603 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 PKD1P5-201ENST00000532415 10291 ntBASIC15.28■□□□□ 0.04
CSF1P09603 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 AC004951.3-201ENST00000418645 1148 ntBASIC15.28■□□□□ 0.04
CSF1P09603 DUTP2-201ENST00000519164 463 ntBASIC15.28■□□□□ 0.04
CSF1P09603 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.28■□□□□ 0.04
CSF1P09603 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CSF1P09603 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.28■□□□□ 0.04
CSF1P09603 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CSF1P09603 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSF1P09603 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSF1P09603 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CSF1P09603 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CSF1P09603 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CSF1P09603 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.27■□□□□ 0.04
CSF1P09603 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.27■□□□□ 0.04
CSF1P09603 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CSF1P09603 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.27■□□□□ 0.04
CSF1P09603 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms