Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 AC008667.4-201ENST00000607370 168 ntBASIC17.15■□□□□ 0.34
HOXC4P09017 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC4P09017 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC4P09017 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC4P09017 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC4P09017 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
HOXC4P09017 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXC4P09017 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
HOXC4P09017 AC046185.3-201ENST00000623228 1824 ntBASIC17.14■□□□□ 0.34
HOXC4P09017 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC4P09017 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXC4P09017 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
HOXC4P09017 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 RPS15P9-201ENST00000494093 319 ntBASIC17.14■□□□□ 0.33
HOXC4P09017 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 TERC-201ENST00000602385 541 ntBASIC17.14■□□□□ 0.33
HOXC4P09017 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXC4P09017 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC4P09017 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXC4P09017 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC4P09017 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC4P09017 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC4P09017 AP002414.1-201ENST00000391405 1147 ntBASIC17.13■□□□□ 0.33
HOXC4P09017 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC4P09017 AC108751.1-201ENST00000490852 363 ntBASIC17.13■□□□□ 0.33
HOXC4P09017 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC4P09017 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
HOXC4P09017 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC4P09017 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC4P09017 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC4P09017 AC140113.2-201ENST00000604370 208 ntBASIC17.13■□□□□ 0.33
HOXC4P09017 AC023511.2-201ENST00000618803 211 ntBASIC17.13■□□□□ 0.33
HOXC4P09017 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC4P09017 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC4P09017 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC4P09017 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC4P09017 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC4P09017 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC4P09017 MED15P5-201ENST00000423150 992 ntBASIC17.12■□□□□ 0.33
HOXC4P09017 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC4P09017 PRSS29P-201ENST00000440800 595 ntBASIC17.12■□□□□ 0.33
HOXC4P09017 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HOXC4P09017 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC4P09017 GGTLC5P-201ENST00000617623 998 ntBASIC17.12■□□□□ 0.33
HOXC4P09017 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC4P09017 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOXC4P09017 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms