Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.13■□□□□ 0.81
TPM2P07951 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM2P07951 AC009065.1-201ENST00000564055 1225 ntBASIC20.13■□□□□ 0.81
TPM2P07951 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM2P07951 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM2P07951 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.13■□□□□ 0.81
TPM2P07951 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPM2P07951 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.12■□□□□ 0.81
TPM2P07951 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
TPM2P07951 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 AC106886.4-201ENST00000623557 2502 ntBASIC20.12■□□□□ 0.81
TPM2P07951 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 ABHD17AP1-201ENST00000358206 933 ntBASIC20.12■□□□□ 0.81
TPM2P07951 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.12■□□□□ 0.81
TPM2P07951 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 AC012618.2-201ENST00000428058 849 ntBASIC20.12■□□□□ 0.81
TPM2P07951 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.12■□□□□ 0.81
TPM2P07951 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
TPM2P07951 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM2P07951 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.12■□□□□ 0.81
TPM2P07951 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.12■□□□□ 0.81
TPM2P07951 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 AL163051.1-201ENST00000569214 1512 ntBASIC20.12■□□□□ 0.81
TPM2P07951 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPM2P07951 C1R-202ENST00000536053 2347 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 KRT8P7-201ENST00000533003 1432 ntBASIC20.11■□□□□ 0.81
TPM2P07951 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.11■□□□□ 0.81
TPM2P07951 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPM2P07951 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.11■□□□□ 0.81
TPM2P07951 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM2P07951 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TPM2P07951 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 AC036111.1-201ENST00000533973 1582 ntBASIC20.1■□□□□ 0.81
TPM2P07951 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 AL158047.1-201ENST00000445918 881 ntBASIC20.1■□□□□ 0.81
TPM2P07951 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM2P07951 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM2P07951 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM2P07951 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
TPM2P07951 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TPM2P07951 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM2P07951 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM2P07951 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms