Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MT-ND3P03897 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND3P03897 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-ND3P03897 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-ND3P03897 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-ND3P03897 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 UPK3BP1-201ENST00000428678 509 ntBASIC18.01■□□□□ 0.47
MT-ND3P03897 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND3P03897 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-ND3P03897 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-ND3P03897 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.01■□□□□ 0.47
MT-ND3P03897 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-ND3P03897 AL023973.1-201ENST00000624619 620 ntBASIC18.01■□□□□ 0.47
MT-ND3P03897 AC132938.6-201ENST00000623828 1655 ntBASIC18.01■□□□□ 0.47
MT-ND3P03897 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-ND3P03897 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND3P03897 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.01■□□□□ 0.47
MT-ND3P03897 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
MT-ND3P03897 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MT-ND3P03897 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND3P03897 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-ND3P03897 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 AC022898.2-201ENST00000616822 1312 ntBASIC18■□□□□ 0.47
MT-ND3P03897 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18■□□□□ 0.47
MT-ND3P03897 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
MT-ND3P03897 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
MT-ND3P03897 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18■□□□□ 0.47
MT-ND3P03897 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18■□□□□ 0.47
MT-ND3P03897 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MT-ND3P03897 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND3P03897 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND3P03897 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MT-ND3P03897 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.99■□□□□ 0.47
MT-ND3P03897 AL671277.2-201ENST00000458060 996 ntBASIC17.99■□□□□ 0.47
MT-ND3P03897 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 AL441883.1-201ENST00000566170 1045 ntBASIC17.99■□□□□ 0.47
MT-ND3P03897 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.99■□□□□ 0.47
MT-ND3P03897 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND3P03897 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
MT-ND3P03897 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
MT-ND3P03897 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
MT-ND3P03897 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MT-ND3P03897 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MT-ND3P03897 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
MT-ND3P03897 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
MT-ND3P03897 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MT-ND3P03897 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms