Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHRNA1P02708 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHRNA1P02708 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA1P02708 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CHRNA1P02708 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHRNA1P02708 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CHRNA1P02708 MYCLP1-201ENST00000372451 1075 ntBASIC19.09■□□□□ 0.65
CHRNA1P02708 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHRNA1P02708 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA1P02708 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA1P02708 AC096734.2-201ENST00000562054 433 ntBASIC19.09■□□□□ 0.65
CHRNA1P02708 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA1P02708 AL078644.1-201ENST00000609881 752 ntBASIC19.09■□□□□ 0.65
CHRNA1P02708 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA1P02708 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA1P02708 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA1P02708 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA1P02708 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
CHRNA1P02708 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNA1P02708 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.08■□□□□ 0.65
CHRNA1P02708 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRNA1P02708 KRT18P28-201ENST00000453838 1332 ntBASIC19.08■□□□□ 0.65
CHRNA1P02708 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA1P02708 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA1P02708 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA1P02708 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.08■□□□□ 0.64
CHRNA1P02708 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA1P02708 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CHRNA1P02708 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA1P02708 GGTLC5P-201ENST00000617623 998 ntBASIC19.08■□□□□ 0.64
CHRNA1P02708 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA1P02708 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA1P02708 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA1P02708 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA1P02708 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA1P02708 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA1P02708 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CHRNA1P02708 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.07■□□□□ 0.64
CHRNA1P02708 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 RHOQP3-201ENST00000437982 621 ntBASIC19.07■□□□□ 0.64
CHRNA1P02708 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CHRNA1P02708 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CHRNA1P02708 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 AC090164.3-201ENST00000610780 2143 ntBASIC19.07■□□□□ 0.64
CHRNA1P02708 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA1P02708 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHRNA1P02708 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.06■□□□□ 0.64
CHRNA1P02708 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.06■□□□□ 0.64
CHRNA1P02708 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CHRNA1P02708 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA1P02708 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 AC254562.1-201ENST00000417586 456 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.06■□□□□ 0.64
CHRNA1P02708 MKNK2P1-201ENST00000437526 628 ntBASIC19.06■□□□□ 0.64
CHRNA1P02708 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms