Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFP01375 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 NCF1C-201ENST00000438382 1427 ntBASIC17.2■□□□□ 0.34
TNFP01375 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TNFP01375 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFP01375 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNFP01375 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 ABALON-201ENST00000629058 1903 ntBASIC17.19■□□□□ 0.34
TNFP01375 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TNFP01375 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TNFP01375 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 AC148477.5-201ENST00000625164 1645 ntBASIC17.19■□□□□ 0.34
TNFP01375 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 KRT18P27-201ENST00000427733 1299 ntBASIC17.19■□□□□ 0.34
TNFP01375 AC136632.2-201ENST00000512891 861 ntBASIC17.19■□□□□ 0.34
TNFP01375 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFP01375 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TNFP01375 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 AC034105.1-201ENST00000563488 319 ntBASIC17.19■□□□□ 0.34
TNFP01375 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFP01375 AC004706.3-202ENST00000621574 984 ntBASIC17.19■□□□□ 0.34
TNFP01375 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFP01375 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
TNFP01375 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFP01375 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFP01375 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFP01375 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFP01375 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.18■□□□□ 0.34
TNFP01375 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 AL591424.1-201ENST00000442569 1213 ntBASIC17.18■□□□□ 0.34
TNFP01375 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TNFP01375 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.18■□□□□ 0.34
TNFP01375 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.18■□□□□ 0.34
TNFP01375 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TNFP01375 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 FAM197Y3-203ENST00000618346 717 ntBASIC17.18■□□□□ 0.34
TNFP01375 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.18■□□□□ 0.34
TNFP01375 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TNFP01375 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.18■□□□□ 0.34
TNFP01375 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TNFP01375 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFP01375 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TNFP01375 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TNFP01375 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TNFP01375 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFP01375 AC073621.1-201ENST00000392730 636 ntBASIC17.17■□□□□ 0.34
TNFP01375 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.17■□□□□ 0.34
TNFP01375 MED15P5-201ENST00000423150 992 ntBASIC17.17■□□□□ 0.34
TNFP01375 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFP01375 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.17■□□□□ 0.34
TNFP01375 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.17■□□□□ 0.34
TNFP01375 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms