Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 KRT18P32-201ENST00000424695 1287 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 AC140658.5-201ENST00000438532 169 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 GAPDHP21-201ENST00000450301 1010 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 KLF2P3-201ENST00000451977 1087 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.93■□□□□ 0.62
TIMP1P01033 AC079140.1-201ENST00000508039 487 ntBASIC18.93■□□□□ 0.62
TIMP1P01033 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.93■□□□□ 0.62
TIMP1P01033 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TIMP1P01033 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.93■□□□□ 0.62
TIMP1P01033 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TIMP1P01033 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TIMP1P01033 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.92■□□□□ 0.62
TIMP1P01033 FAM58DP-201ENST00000428076 619 ntBASIC18.92■□□□□ 0.62
TIMP1P01033 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
TIMP1P01033 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.92■□□□□ 0.62
TIMP1P01033 RN7SL589P-201ENST00000481268 310 ntBASIC18.92■□□□□ 0.62
TIMP1P01033 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.92■□□□□ 0.62
TIMP1P01033 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.92■□□□□ 0.62
TIMP1P01033 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TIMP1P01033 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 AC129492.6-201ENST00000611383 1305 ntBASIC18.92■□□□□ 0.62
TIMP1P01033 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TIMP1P01033 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 FAM207CP-201ENST00000443486 507 ntBASIC18.91■□□□□ 0.62
TIMP1P01033 UGT1A2P-201ENST00000454886 866 ntBASIC18.91■□□□□ 0.62
TIMP1P01033 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.91■□□□□ 0.62
TIMP1P01033 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 AC243562.1-201ENST00000560672 389 ntBASIC18.91■□□□□ 0.62
TIMP1P01033 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.91■□□□□ 0.62
TIMP1P01033 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TIMP1P01033 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TIMP1P01033 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.9■□□□□ 0.62
TIMP1P01033 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 AL096828.2-201ENST00000567259 1965 ntBASIC18.9■□□□□ 0.62
TIMP1P01033 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 AC107890.1-201ENST00000422478 521 ntBASIC18.9■□□□□ 0.62
TIMP1P01033 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMP1P01033 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.9■□□□□ 0.62
TIMP1P01033 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.9■□□□□ 0.62
TIMP1P01033 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.9■□□□□ 0.62
TIMP1P01033 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP1P01033 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.9■□□□□ 0.62
TIMP1P01033 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.9■□□□□ 0.62
TIMP1P01033 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TIMP1P01033 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TIMP1P01033 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.89■□□□□ 0.62
TIMP1P01033 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.89■□□□□ 0.62
TIMP1P01033 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms