Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.75■□□□□ 0.43
VAPBO95292 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
VAPBO95292 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
VAPBO95292 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VAPBO95292 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.75■□□□□ 0.43
VAPBO95292 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VAPBO95292 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VAPBO95292 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.74■□□□□ 0.43
VAPBO95292 TSPY22P-201ENST00000427496 604 ntBASIC17.74■□□□□ 0.43
VAPBO95292 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
VAPBO95292 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.74■□□□□ 0.43
VAPBO95292 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.74■□□□□ 0.43
VAPBO95292 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
VAPBO95292 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VAPBO95292 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.73■□□□□ 0.43
VAPBO95292 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
VAPBO95292 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
VAPBO95292 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VAPBO95292 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.73■□□□□ 0.43
VAPBO95292 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.73■□□□□ 0.43
VAPBO95292 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.73■□□□□ 0.43
VAPBO95292 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 GUSBP12-201ENST00000513727 720 ntBASIC17.73■□□□□ 0.43
VAPBO95292 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
VAPBO95292 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.73■□□□□ 0.43
VAPBO95292 AC080080.1-201ENST00000625121 2420 ntBASIC17.73■□□□□ 0.43
VAPBO95292 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
VAPBO95292 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VAPBO95292 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VAPBO95292 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 AC096633.1-201ENST00000422446 749 ntBASIC17.72■□□□□ 0.43
VAPBO95292 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.72■□□□□ 0.43
VAPBO95292 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.72■□□□□ 0.43
VAPBO95292 AL136038.3-201ENST00000561909 1096 ntBASIC17.72■□□□□ 0.43
VAPBO95292 AC011498.5-201ENST00000592027 486 ntBASIC17.72■□□□□ 0.43
VAPBO95292 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms