Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
GPC4O75487 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
GPC4O75487 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GPC4O75487 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.71■□□□□ 0.43
GPC4O75487 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.71■□□□□ 0.43
GPC4O75487 AL445228.2-201ENST00000605589 952 ntBASIC17.71■□□□□ 0.43
GPC4O75487 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.71■□□□□ 0.43
GPC4O75487 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
GPC4O75487 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GPC4O75487 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.71■□□□□ 0.43
GPC4O75487 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
GPC4O75487 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
GPC4O75487 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GPC4O75487 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GPC4O75487 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GPC4O75487 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 Z83836.1-201ENST00000624605 1642 ntBASIC17.7■□□□□ 0.42
GPC4O75487 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC4O75487 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 KRT18P65-201ENST00000439811 1286 ntBASIC17.7■□□□□ 0.42
GPC4O75487 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.7■□□□□ 0.42
GPC4O75487 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 AC116407.4-201ENST00000623319 1061 ntBASIC17.7■□□□□ 0.42
GPC4O75487 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
GPC4O75487 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.7■□□□□ 0.42
GPC4O75487 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GPC4O75487 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
GPC4O75487 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC4O75487 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GPC4O75487 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms