Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.91■□□□□ 0.14
PTP4A3O75365 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.91■□□□□ 0.14
PTP4A3O75365 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTP4A3O75365 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.9■□□□□ 0.14
PTP4A3O75365 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 AC116353.5-201ENST00000638148 1699 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 AC011676.5-201ENST00000624864 2660 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PTP4A3O75365 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 COX5BP2-201ENST00000392354 334 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PTP4A3O75365 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 AL390719.2-201ENST00000606993 987 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 AL139327.4-201ENST00000612362 153 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PTP4A3O75365 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTP4A3O75365 AC073912.3-201ENST00000624414 853 ntBASIC15.9■□□□□ 0.14
PTP4A3O75365 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PTP4A3O75365 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.9■□□□□ 0.14
PTP4A3O75365 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.9■□□□□ 0.14
PTP4A3O75365 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTP4A3O75365 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.9■□□□□ 0.14
PTP4A3O75365 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.89■□□□□ 0.13
PTP4A3O75365 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.89■□□□□ 0.13
PTP4A3O75365 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC112907.2-201ENST00000448639 330 ntBASIC15.89■□□□□ 0.13
PTP4A3O75365 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.89■□□□□ 0.13
PTP4A3O75365 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTP4A3O75365 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTP4A3O75365 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A3O75365 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.89■□□□□ 0.13
PTP4A3O75365 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PTP4A3O75365 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.89■□□□□ 0.13
PTP4A3O75365 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.89■□□□□ 0.13
PTP4A3O75365 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTP4A3O75365 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.88■□□□□ 0.13
PTP4A3O75365 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTP4A3O75365 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.88■□□□□ 0.13
PTP4A3O75365 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms