Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SH2D1AO60880 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SH2D1AO60880 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
SH2D1AO60880 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SH2D1AO60880 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.21□□□□□ -0.29
SH2D1AO60880 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SH2D1AO60880 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
SH2D1AO60880 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SH2D1AO60880 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SH2D1AO60880 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SH2D1AO60880 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.21□□□□□ -0.29
SH2D1AO60880 AP005242.2-201ENST00000580065 1175 ntBASIC13.21□□□□□ -0.29
SH2D1AO60880 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 REXO1L10P-201ENST00000615707 1290 ntBASIC13.21□□□□□ -0.29
SH2D1AO60880 REXO1L12P-201ENST00000622156 912 ntBASIC13.21□□□□□ -0.29
SH2D1AO60880 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
SH2D1AO60880 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.21□□□□□ -0.29
SH2D1AO60880 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SH2D1AO60880 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SH2D1AO60880 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SH2D1AO60880 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.21□□□□□ -0.3
SH2D1AO60880 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SH2D1AO60880 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.21□□□□□ -0.3
SH2D1AO60880 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
SH2D1AO60880 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
SH2D1AO60880 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SH2D1AO60880 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SH2D1AO60880 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SH2D1AO60880 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.2□□□□□ -0.3
SH2D1AO60880 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 KRT18P29-201ENST00000397031 1267 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms