Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KRT19P2-202ENST00000557173 1012 ntBASIC16.66■□□□□ 0.26
URB1O60287 AC025678.2-201ENST00000562061 970 ntBASIC16.66■□□□□ 0.26
URB1O60287 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
URB1O60287 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.65■□□□□ 0.26
URB1O60287 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.65■□□□□ 0.26
URB1O60287 MEIS3P1-201ENST00000495167 958 ntBASIC16.65■□□□□ 0.26
URB1O60287 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.65■□□□□ 0.26
URB1O60287 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.65■□□□□ 0.26
URB1O60287 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 AC092902.6-201ENST00000641783 218 ntBASIC16.65■□□□□ 0.26
URB1O60287 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
URB1O60287 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
URB1O60287 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.65■□□□□ 0.26
URB1O60287 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.65■□□□□ 0.26
URB1O60287 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
URB1O60287 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
URB1O60287 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
URB1O60287 HLA-V-201ENST00000429037 534 ntBASIC16.64■□□□□ 0.25
URB1O60287 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.64■□□□□ 0.25
URB1O60287 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.64■□□□□ 0.25
URB1O60287 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.64■□□□□ 0.25
URB1O60287 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
URB1O60287 AC105339.1-204ENST00000636249 355 ntBASIC16.64■□□□□ 0.25
URB1O60287 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
URB1O60287 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
URB1O60287 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 AC096633.1-201ENST00000422446 749 ntBASIC16.63■□□□□ 0.25
URB1O60287 FAM58CP-201ENST00000435741 640 ntBASIC16.63■□□□□ 0.25
URB1O60287 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.63■□□□□ 0.25
URB1O60287 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.63■□□□□ 0.25
URB1O60287 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 AC004835.2-201ENST00000603762 682 ntBASIC16.63■□□□□ 0.25
URB1O60287 AC010654.1-201ENST00000615722 808 ntBASIC16.63■□□□□ 0.25
URB1O60287 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.63■□□□□ 0.25
URB1O60287 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.63■□□□□ 0.25
URB1O60287 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.63■□□□□ 0.25
URB1O60287 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
URB1O60287 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 AC002472.2-201ENST00000442739 958 ntBASIC16.63■□□□□ 0.25
URB1O60287 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.63■□□□□ 0.25
URB1O60287 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
URB1O60287 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
URB1O60287 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
URB1O60287 MIR4751-201ENST00000578027 74 ntBASIC16.63■□□□□ 0.25
URB1O60287 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
URB1O60287 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
URB1O60287 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
URB1O60287 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms