Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 LINC01451-201ENST00000623792 534 ntBASIC21.89■■□□□ 1.09
SRGAP3O43295 AC073592.5-201ENST00000624854 528 ntBASIC21.89■■□□□ 1.09
SRGAP3O43295 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.89■■□□□ 1.09
SRGAP3O43295 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.89■■□□□ 1.09
SRGAP3O43295 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.89■■□□□ 1.09
SRGAP3O43295 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.89■■□□□ 1.09
SRGAP3O43295 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.88■■□□□ 1.09
SRGAP3O43295 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.88■■□□□ 1.09
SRGAP3O43295 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SRGAP3O43295 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.88■■□□□ 1.09
SRGAP3O43295 FAAHP1-202ENST00000446499 1238 ntBASIC21.88■■□□□ 1.09
SRGAP3O43295 FGFR3P6-201ENST00000457012 610 ntBASIC21.88■■□□□ 1.09
SRGAP3O43295 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.88■■□□□ 1.09
SRGAP3O43295 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.88■■□□□ 1.09
SRGAP3O43295 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.88■■□□□ 1.09
SRGAP3O43295 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.88■■□□□ 1.09
SRGAP3O43295 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 AL031008.1-201ENST00000619963 541 ntBASIC21.88■■□□□ 1.09
SRGAP3O43295 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.88■■□□□ 1.09
SRGAP3O43295 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.88■■□□□ 1.09
SRGAP3O43295 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.88■■□□□ 1.09
SRGAP3O43295 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SRGAP3O43295 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 IGHV3-52-201ENST00000519770 353 ntBASIC21.87■■□□□ 1.09
SRGAP3O43295 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 AL121912.1-201ENST00000603683 238 ntBASIC21.87■■□□□ 1.09
SRGAP3O43295 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.87■■□□□ 1.09
SRGAP3O43295 AC133963.1-201ENST00000504166 1679 ntBASIC21.87■■□□□ 1.09
SRGAP3O43295 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 HLA-J-201ENST00000462773 1622 ntBASIC21.87■■□□□ 1.09
SRGAP3O43295 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SRGAP3O43295 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.86■■□□□ 1.09
SRGAP3O43295 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SRGAP3O43295 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SRGAP3O43295 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
SRGAP3O43295 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
SRGAP3O43295 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.86■■□□□ 1.09
SRGAP3O43295 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SRGAP3O43295 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SRGAP3O43295 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.86■■□□□ 1.09
SRGAP3O43295 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SRGAP3O43295 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SRGAP3O43295 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.85■■□□□ 1.09
SRGAP3O43295 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.85■■□□□ 1.09
SRGAP3O43295 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SRGAP3O43295 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.85■■□□□ 1.09
SRGAP3O43295 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SRGAP3O43295 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SRGAP3O43295 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms