Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AL390955.1-201ENST00000428694 934 ntBASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AL158047.1-201ENST00000445918 881 ntBASIC16.34■□□□□ 0.21
TNFRSF11BO00300 C2orf69P3-201ENST00000565542 1120 ntBASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AP000525.1-201ENST00000608286 694 ntBASIC16.34■□□□□ 0.21
TNFRSF11BO00300 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNFRSF11BO00300 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TNFRSF11BO00300 AGGF1P2-201ENST00000426656 2106 ntBASIC16.33■□□□□ 0.21
TNFRSF11BO00300 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 PRORSD1P-201ENST00000295112 541 ntBASIC16.33■□□□□ 0.2
TNFRSF11BO00300 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 PVRIG2P-201ENST00000435460 978 ntBASIC16.33■□□□□ 0.2
TNFRSF11BO00300 AC009947.2-201ENST00000444014 672 ntBASIC16.33■□□□□ 0.2
TNFRSF11BO00300 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 AC060834.1-201ENST00000443027 2032 ntBASIC16.33■□□□□ 0.2
TNFRSF11BO00300 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
TNFRSF11BO00300 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 KRT18P65-201ENST00000439811 1286 ntBASIC16.32■□□□□ 0.2
TNFRSF11BO00300 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AC113404.2-201ENST00000507884 177 ntBASIC16.32■□□□□ 0.2
TNFRSF11BO00300 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 KRT8P47-201ENST00000604727 1398 ntBASIC16.32■□□□□ 0.2
TNFRSF11BO00300 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AC018695.7-201ENST00000624587 2492 ntBASIC16.32■□□□□ 0.2
TNFRSF11BO00300 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
TNFRSF11BO00300 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 PCDHA14-201ENST00000506751 2298 ntBASIC16.31■□□□□ 0.2
TNFRSF11BO00300 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TNFRSF11BO00300 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms