Protein–RNA interactions for Protein: O00192

ARVCF, Armadillo repeat protein deleted in velo-cardio-facial syndrome, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCFO00192 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.21■□□□□ 0.67
ARVCFO00192 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.21■□□□□ 0.67
ARVCFO00192 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.21■□□□□ 0.67
ARVCFO00192 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.21■□□□□ 0.67
ARVCFO00192 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.21■□□□□ 0.67
ARVCFO00192 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARVCFO00192 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.2■□□□□ 0.66
ARVCFO00192 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.2■□□□□ 0.66
ARVCFO00192 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 AC092919.2-201ENST00000623631 1645 ntBASIC19.2■□□□□ 0.66
ARVCFO00192 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ARVCFO00192 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARVCFO00192 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARVCFO00192 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARVCFO00192 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.19■□□□□ 0.66
ARVCFO00192 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ARVCFO00192 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.19■□□□□ 0.66
ARVCFO00192 AC112191.1-201ENST00000523689 701 ntBASIC19.19■□□□□ 0.66
ARVCFO00192 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.19■□□□□ 0.66
ARVCFO00192 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
ARVCFO00192 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.19■□□□□ 0.66
ARVCFO00192 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
ARVCFO00192 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.19■□□□□ 0.66
ARVCFO00192 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.19■□□□□ 0.66
ARVCFO00192 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARVCFO00192 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ARVCFO00192 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.18■□□□□ 0.66
ARVCFO00192 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
ARVCFO00192 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 FAM86GP-201ENST00000448322 971 ntBASIC19.18■□□□□ 0.66
ARVCFO00192 AL513480.1-201ENST00000451731 511 ntBASIC19.18■□□□□ 0.66
ARVCFO00192 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.18■□□□□ 0.66
ARVCFO00192 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.18■□□□□ 0.66
ARVCFO00192 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.18■□□□□ 0.66
ARVCFO00192 AC138761.1-201ENST00000584393 385 ntBASIC19.18■□□□□ 0.66
ARVCFO00192 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.18■□□□□ 0.66
ARVCFO00192 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ARVCFO00192 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.18■□□□□ 0.66
ARVCFO00192 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARVCFO00192 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.18■□□□□ 0.66
ARVCFO00192 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
ARVCFO00192 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
ARVCFO00192 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.17■□□□□ 0.66
ARVCFO00192 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.17■□□□□ 0.66
ARVCFO00192 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ARVCFO00192 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ARVCFO00192 ADH5P3-201ENST00000433842 1137 ntBASIC19.17■□□□□ 0.66
ARVCFO00192 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ARVCFO00192 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.17■□□□□ 0.66
ARVCFO00192 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.17■□□□□ 0.66
ARVCFO00192 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.17■□□□□ 0.66
ARVCFO00192 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.17■□□□□ 0.66
ARVCFO00192 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARVCFO00192 ACTL9-202ENST00000612068 1252 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms