Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 AC002056.1-201ENST00000395613 760 ntBASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 TIMM8BP1-201ENST00000452384 211 ntBASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PLEKHD1A6NEE1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 AJ011932.1-201ENST00000621707 465 ntBASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PLEKHD1A6NEE1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 AC067863.1-201ENST00000494933 530 ntBASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 DUX4L27-201ENST00000554796 1261 ntBASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PLEKHD1A6NEE1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 AL355306.1-201ENST00000415580 579 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 SLC25A6P2-201ENST00000497974 877 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 RNA5SP421-201ENST00000516864 134 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 AC099522.2-201ENST00000607001 744 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 Z92544.3-201ENST00000624747 417 ntBASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PLEKHD1A6NEE1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 AL671277.1-201ENST00000429656 993 ntBASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 KRT8P48-201ENST00000515599 1220 ntBASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 FAM86C2P-203ENST00000528684 1004 ntBASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 AC069262.1-201ENST00000539058 672 ntBASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
PLEKHD1A6NEE1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.89
PLEKHD1A6NEE1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PLEKHD1A6NEE1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PLEKHD1A6NEE1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC26.88■■□□□ 1.89
PLEKHD1A6NEE1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms