Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 AL845331.1-201ENST00000424978 1190 ntBASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 TSPY22P-201ENST00000427496 604 ntBASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM49BA6NDI0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 RN7SL606P-201ENST00000472779 293 ntBASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 KRT18P21-201ENST00000515767 1272 ntBASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 AL592071.1-201ENST00000611956 408 ntBASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM49BA6NDI0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM49BA6NDI0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms