Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 UNC93B2-201ENST00000285383 730 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PRORSD1P-201ENST00000295112 541 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC012618.2-201ENST00000428058 849 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 RBM17P1-201ENST00000453646 1190 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC116562.4-202ENST00000641738 218 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 AC105020.1-201ENST00000435356 2205 ntBASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TRAV5A0A0B4J249 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AP000525.1-201ENST00000608286 694 ntBASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AC079328.2-201ENST00000561241 3354 ntBASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV5A0A0B4J249 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 UBE2SP1-201ENST00000450587 669 ntBASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 TSPY20P-201ENST00000450910 630 ntBASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV5A0A0B4J249 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms