Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 KRT87P-202ENST00000534226 1464 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AC010141.2-201ENST00000452426 721 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AC131212.1-201ENST00000613771 668 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AC011298.3-201ENST00000615796 283 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 HLA-J-201ENST00000462773 1622 ntBASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV20-1A0A075B6N2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRBV20-1A0A075B6N2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 SRD5A1P1-201ENST00000442297 786 ntBASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 AL356441.2-201ENST00000443009 864 ntBASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 GPAT2P1-201ENST00000444924 1672 ntBASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TRBV20-1A0A075B6N2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms