Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AC008764.6-201ENST00000595909 2069 ntBASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AC073648.2-201ENST00000510116 352 ntBASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AL139288.1-201ENST00000623748 933 ntBASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 AC004817.3-201ENST00000602957 2129 ntBASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SLC4A4Q9Y6R1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC4A4Q9Y6R1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 SPDYE21P-201ENST00000413323 827 ntBASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 IGHV3-52-201ENST00000519770 353 ntBASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 AC064862.7-201ENST00000604520 867 ntBASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 AL773604.1-201ENST00000617417 272 ntBASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 HLA-A-201ENST00000376802 1334 ntBASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC4A4Q9Y6R1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 AC005104.2-201ENST00000427818 678 ntBASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 AC018712.1-201ENST00000455767 687 ntBASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 AC002558.1-201ENST00000488906 803 ntBASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 AC138932.1-201ENST00000534164 6830 ntBASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC4A4Q9Y6R1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms