Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 KRT18P38-201ENST00000449496 1282 ntBASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 AC133561.5-201ENST00000635547 218 ntBASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHA3Q9Y5H8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 AC116353.5-201ENST00000638148 1699 ntBASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 TSPY5P-201ENST00000426936 936 ntBASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 AL139327.4-201ENST00000612362 153 ntBASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 HYMAI.1-201ENST00000620949 238 ntBASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 AC097374.2-201ENST00000618617 1306 ntBASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHA3Q9Y5H8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 AC005332.3-201ENST00000589904 676 ntBASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDHA3Q9Y5H8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 RNF152P1-201ENST00000397754 604 ntBASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDHA3Q9Y5H8 HOMER2P1-201ENST00000455653 964 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms