Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHB1Q9Y5F3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 RN7SL606P-201ENST00000472779 293 ntBASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 AC068472.1-201ENST00000474589 881 ntBASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 AC139530.3-201ENST00000620344 690 ntBASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 IL9RP2-201ENST00000423948 1312 ntBASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHB1Q9Y5F3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 AC009949.1-201ENST00000623048 1830 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 VENTXP7-201ENST00000475503 772 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 RNA5SP419-201ENST00000515908 135 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 AP001005.1-201ENST00000571755 1248 ntBASIC17.66■□□□□ 0.42
PCDHB1Q9Y5F3 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms