Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHB11Q9Y5F2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AL591684.3-201ENST00000605187 298 ntBASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 AL773604.1-201ENST00000617417 272 ntBASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHB11Q9Y5F2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 AF186996.4-201ENST00000467186 377 ntBASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHB11Q9Y5F2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 AKR1C7P-201ENST00000305623 895 ntBASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 FAM197Y8-203ENST00000450145 560 ntBASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 AF238378.1-201ENST00000526806 358 ntBASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHB11Q9Y5F2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms