Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 BX842568.4-201ENST00000421222 227 ntBASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 AC106730.1-201ENST00000566722 1090 ntBASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB9Q9Y5E1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF259P1-201ENST00000407656 1365 ntBASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 BNIP3P18-201ENST00000593976 575 ntBASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 AC097374.2-201ENST00000618617 1306 ntBASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB9Q9Y5E1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 AC096582.2-201ENST00000510860 516 ntBASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 RNA5SP419-201ENST00000515908 135 ntBASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 AC009533.2-201ENST00000543664 586 ntBASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB9Q9Y5E1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms