Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 AC105020.1-201ENST00000435356 2205 ntBASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 RCC2P3-201ENST00000418112 1537 ntBASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 AC005521.1-201ENST00000393351 872 ntBASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 AC008622.2-201ENST00000617006 1229 ntBASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
R3HCC1Q9Y3T6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
R3HCC1Q9Y3T6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 AL023284.2-201ENST00000405850 579 ntBASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 KRT18P21-201ENST00000515767 1272 ntBASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 GPAT2P1-201ENST00000444924 1672 ntBASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
R3HCC1Q9Y3T6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 AP000523.1-201ENST00000398242 1049 ntBASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms