Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 AL138781.2-201ENST00000617896 1843 ntBASIC18.84■□□□□ 0.61
PRG3Q9Y2Y8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PRG3Q9Y2Y8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 AC023274.1-201ENST00000418278 595 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 AC005104.2-201ENST00000427818 678 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 SIGLEC30P-201ENST00000455569 941 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 AC040169.1-201ENST00000565382 521 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 AC064836.3-201ENST00000607928 673 ntBASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.83■□□□□ 0.6
PRG3Q9Y2Y8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AL691403.2-201ENST00000618460 490 ntBASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AC055717.3-201ENST00000622967 595 ntBASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 NCF1C-201ENST00000438382 1427 ntBASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
PRG3Q9Y2Y8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 YBX2P1-201ENST00000394192 760 ntBASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 UPF3AP3-201ENST00000420996 769 ntBASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 DDX43P3-201ENST00000441064 443 ntBASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRG3Q9Y2Y8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms