Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RPH3AQ9Y2J0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 PKD1P5-201ENST00000532415 10291 ntBASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 FAAHP1-202ENST00000446499 1238 ntBASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AL133373.2-201ENST00000623187 2828 ntBASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 AC100803.2-201ENST00000562459 1963 ntBASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.23■□□□□ 0.19
RPH3AQ9Y2J0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 AC018470.1-201ENST00000624790 3129 ntBASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 AC111152.3-201ENST00000569699 673 ntBASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 AC005336.2-201ENST00000593183 939 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms