Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 KLF4P1-201ENST00000412782 1185 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 BX005266.1-201ENST00000473402 457 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 AC021087.4-201ENST00000563761 564 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 AL139288.1-201ENST00000623748 933 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 AC148477.8-201ENST00000624298 468 ntBASIC18.85■□□□□ 0.61
SIX4Q9UIU6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
SIX4Q9UIU6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AC003669.1-201ENST00000334569 611 ntBASIC18.84■□□□□ 0.61
SIX4Q9UIU6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AC026396.1-201ENST00000419388 421 ntBASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 FDX1P1-201ENST00000449115 551 ntBASIC18.84■□□□□ 0.61
SIX4Q9UIU6 FAM197Y8-203ENST00000450145 560 ntBASIC18.84■□□□□ 0.61
SIX4Q9UIU6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.84■□□□□ 0.61
SIX4Q9UIU6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.84■□□□□ 0.61
SIX4Q9UIU6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SIX4Q9UIU6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 MYCLP1-201ENST00000372451 1075 ntBASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AC018712.1-201ENST00000455767 687 ntBASIC18.83■□□□□ 0.6
SIX4Q9UIU6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AC025062.2-201ENST00000605477 670 ntBASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AL139327.4-201ENST00000612362 153 ntBASIC18.83■□□□□ 0.6
SIX4Q9UIU6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 AC009336.1-201ENST00000608941 1553 ntBASIC18.83■□□□□ 0.6
SIX4Q9UIU6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIX4Q9UIU6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX4Q9UIU6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.82■□□□□ 0.6
SIX4Q9UIU6 LYSMD4-203ENST00000378904 2122 ntBASIC18.82■□□□□ 0.6
SIX4Q9UIU6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX4Q9UIU6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIX4Q9UIU6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SIX4Q9UIU6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms