Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 GRAMD4P3-201ENST00000621665 1669 ntBASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RIMBP3Q9UFD9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 AC007967.4-201ENST00000614700 386 ntBASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
RIMBP3Q9UFD9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 AC103810.3-201ENST00000583567 96 ntBASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 HLA-V-204ENST00000476601 1289 ntBASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 TEX28P1-201ENST00000613479 1221 ntBASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 TEX28P2-201ENST00000617764 1221 ntBASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RIMBP3Q9UFD9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 AC008267.7-201ENST00000624570 1194 ntBASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
RIMBP3Q9UFD9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 MIR663B-201ENST00000408361 115 ntBASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AL355994.2-201ENST00000447882 704 ntBASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 GABARAPL3-202ENST00000624044 1851 ntBASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RIMBP3Q9UFD9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC27.64■■■□□ 2.02
RIMBP3Q9UFD9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms