Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 AC009949.1-201ENST00000623048 1830 ntBASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRIT1Q9P2V4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 AC109462.3-201ENST00000573934 613 ntBASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 BX276092.7-203ENST00000637198 1536 ntBASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRIT1Q9P2V4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 AC073621.1-201ENST00000392730 636 ntBASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 KLF4P1-201ENST00000412782 1185 ntBASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 AC009947.1-201ENST00000444350 727 ntBASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 AC136632.2-201ENST00000512891 861 ntBASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LRIT1Q9P2V4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 AP000997.3-201ENST00000623333 2250 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 AC003669.1-201ENST00000334569 611 ntBASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRIT1Q9P2V4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms