Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 TFAMP1-201ENST00000412727 736 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 BASP1P1-201ENST00000430708 665 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC067863.1-201ENST00000494933 530 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC097637.2-201ENST00000624096 1997 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AL096828.2-201ENST00000567259 1965 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 LINC01225-203ENST00000563550 1244 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC025678.2-201ENST00000562061 970 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 AC025048.6-201ENST00000634326 1161 ntBASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LRP1BQ9NZR2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 HILS1-202ENST00000545329 423 ntBASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 AC104581.1-202ENST00000635932 2618 ntBASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LRP1BQ9NZR2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LRP1BQ9NZR2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms