Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
NDE1Q9NXR1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
NDE1Q9NXR1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 MIR3180-4-201ENST00000582223 153 ntBASIC17.14■□□□□ 0.33
NDE1Q9NXR1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 AC110285.5-201ENST00000611501 352 ntBASIC17.14■□□□□ 0.33
NDE1Q9NXR1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDE1Q9NXR1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AC016396.2-201ENST00000562575 1417 ntBASIC17.13■□□□□ 0.33
NDE1Q9NXR1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 KRT18P23-201ENST00000435622 1283 ntBASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AC133681.1-201ENST00000465482 601 ntBASIC17.13■□□□□ 0.33
NDE1Q9NXR1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AP003097.1-201ENST00000530657 1135 ntBASIC17.13■□□□□ 0.33
NDE1Q9NXR1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDE1Q9NXR1 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 AC068418.2-201ENST00000577309 3703 ntBASIC17.12■□□□□ 0.33
NDE1Q9NXR1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.12■□□□□ 0.33
NDE1Q9NXR1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NDE1Q9NXR1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms