Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.41■□□□□ 0.22
HPF1Q9NWY4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 AC099398.1-201ENST00000567919 2776 ntBASIC16.41■□□□□ 0.22
HPF1Q9NWY4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
HPF1Q9NWY4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AC104581.1-202ENST00000635932 2618 ntBASIC16.4■□□□□ 0.22
HPF1Q9NWY4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AC011467.2-201ENST00000598425 242 ntBASIC16.4■□□□□ 0.22
HPF1Q9NWY4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.4■□□□□ 0.22
HPF1Q9NWY4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPF1Q9NWY4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.39■□□□□ 0.22
HPF1Q9NWY4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HPF1Q9NWY4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.39■□□□□ 0.22
HPF1Q9NWY4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
HPF1Q9NWY4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.39■□□□□ 0.21
HPF1Q9NWY4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPF1Q9NWY4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms