Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AC096633.1-201ENST00000422446 749 ntBASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AC104819.1-201ENST00000504587 486 ntBASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CUEDC1Q9NWM3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 AC007967.3-201ENST00000434308 558 ntBASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 DDX43P3-201ENST00000441064 443 ntBASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 AC012615.1-201ENST00000565797 1299 ntBASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CUEDC1Q9NWM3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 MINOS1P3-201ENST00000457048 203 ntBASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 BNIP3P18-201ENST00000593976 575 ntBASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 GNAS-203ENST00000306120 1878 ntBASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CUEDC1Q9NWM3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.08■□□□□ 0.33
CUEDC1Q9NWM3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 AC097374.2-201ENST00000618617 1306 ntBASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms