Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 NMU-203ENST00000507338 658 ntTSL 3 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 DUT-210ENST00000559935 569 ntTSL 3 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 AC129492.6-201ENST00000611383 1305 ntBASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 AC135776.1-201ENST00000319817 2481 ntBASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC25.06■■□□□ 1.6
SLC52A1Q9NWF4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 SLC25A6P2-201ENST00000497974 877 ntBASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 AC239800.4-201ENST00000603712 296 ntBASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC52A1Q9NWF4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 CYP51A1P2-201ENST00000419457 1499 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 AL355306.1-201ENST00000415580 579 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 FAM86GP-201ENST00000448322 971 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 AL390955.2-201ENST00000603032 514 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 AC099522.2-201ENST00000607001 744 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 AC026120.1-201ENST00000611536 926 ntBASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC52A1Q9NWF4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 AC067863.1-201ENST00000494933 530 ntBASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 FAM86C2P-203ENST00000528684 1004 ntBASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 AL135999.2-201ENST00000622438 1686 ntBASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC52A1Q9NWF4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC25.02■■□□□ 1.6
SLC52A1Q9NWF4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms