Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 AC004832.2-201ENST00000426397 482 ntBASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FBXO28Q9NVF7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 IGHV3-65-201ENST00000523210 341 ntBASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FBXO28Q9NVF7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC002558.1-201ENST00000488906 803 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC018845.2-201ENST00000568326 409 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC002347.1-201ENST00000569543 541 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 MIR4751-201ENST00000578027 74 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC008667.4-201ENST00000607370 168 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC004790.2-201ENST00000623588 572 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 AC092865.6-201ENST00000642101 219 ntBASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.21■□□□□ 0.83
FBXO28Q9NVF7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 REXO1L11P-201ENST00000620964 1927 ntBASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO28Q9NVF7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms