Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 POM121L3P-201ENST00000419331 1163 ntBASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 HCG4P8-203ENST00000443049 980 ntBASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BLOC1S4Q9NUP1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BLOC1S4Q9NUP1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 STK25P1-201ENST00000585406 838 ntBASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 AC132938.5-201ENST00000624980 1813 ntBASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
BLOC1S4Q9NUP1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BLOC1S4Q9NUP1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms