Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL591424.1-201ENST00000442569 1213 ntBASIC18.26■□□□□ 0.51
HPS4Q9NQG7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 AL022326.1-202ENST00000641533 845 ntBASIC18.26■□□□□ 0.51
HPS4Q9NQG7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 AC004817.3-201ENST00000602957 2129 ntBASIC18.26■□□□□ 0.51
HPS4Q9NQG7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS4Q9NQG7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AC005332.8-201ENST00000622750 2735 ntBASIC18.25■□□□□ 0.51
HPS4Q9NQG7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 KRT18P3-201ENST00000451602 1288 ntBASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 BCL2-203ENST00000589955 5011 ntBASIC18.25■□□□□ 0.51
HPS4Q9NQG7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS4Q9NQG7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 AC005104.2-201ENST00000427818 678 ntBASIC18.24■□□□□ 0.51
HPS4Q9NQG7 AC092183.1-201ENST00000469884 875 ntBASIC18.24■□□□□ 0.51
HPS4Q9NQG7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS4Q9NQG7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS4Q9NQG7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms