Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
A1CFQ9NQ94 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
A1CFQ9NQ94 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 RNA5SP416-201ENST00000516838 111 ntBASIC20.06■□□□□ 0.8
A1CFQ9NQ94 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 AC040169.1-201ENST00000565382 521 ntBASIC20.06■□□□□ 0.8
A1CFQ9NQ94 STK25P1-201ENST00000585406 838 ntBASIC20.06■□□□□ 0.8
A1CFQ9NQ94 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.06■□□□□ 0.8
A1CFQ9NQ94 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 YBX2P1-201ENST00000394192 760 ntBASIC20.05■□□□□ 0.8
A1CFQ9NQ94 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AC005104.2-201ENST00000427818 678 ntBASIC20.05■□□□□ 0.8
A1CFQ9NQ94 SIGLEC30P-201ENST00000455569 941 ntBASIC20.05■□□□□ 0.8
A1CFQ9NQ94 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.05■□□□□ 0.8
A1CFQ9NQ94 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 NCF1C-201ENST00000438382 1427 ntBASIC20.04■□□□□ 0.8
A1CFQ9NQ94 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 AC010327.4-202ENST00000591484 748 ntBASIC20.04■□□□□ 0.8
A1CFQ9NQ94 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 AC064836.3-201ENST00000607928 673 ntBASIC20.04■□□□□ 0.8
A1CFQ9NQ94 AC055717.3-201ENST00000622967 595 ntBASIC20.04■□□□□ 0.8
A1CFQ9NQ94 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
A1CFQ9NQ94 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
A1CFQ9NQ94 AC090164.3-201ENST00000610780 2143 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms