Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 KRT18P41-201ENST00000518924 1277 ntBASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 BID-214ENST00000617586 542 ntTSL 5 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VCX3AQ9NNX9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 AC093010.1-201ENST00000473625 1624 ntBASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 LSM12P1-201ENST00000411836 588 ntBASIC16.52■□□□□ 0.24
VCX3AQ9NNX9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 KRT8P3-201ENST00000519669 1449 ntBASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 AC092068.3-201ENST00000587894 2016 ntBASIC16.52■□□□□ 0.23
VCX3AQ9NNX9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 AP000593.1-201ENST00000393668 712 ntBASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CYP2T1P-201ENST00000432607 1285 ntBASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.51■□□□□ 0.23
VCX3AQ9NNX9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCX3AQ9NNX9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCX3AQ9NNX9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCX3AQ9NNX9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.5■□□□□ 0.23
VCX3AQ9NNX9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms