Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 AC011676.5-201ENST00000624864 2660 ntBASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 AC009154.2-201ENST00000621177 724 ntBASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
POLR2J3Q9H1A7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 RASA4DP-201ENST00000460726 1199 ntBASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.35■□□□□ 0.21
POLR2J3Q9H1A7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 AL136038.4-201ENST00000603606 1261 ntBASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 AC140113.3-201ENST00000605663 199 ntBASIC16.34■□□□□ 0.21
POLR2J3Q9H1A7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms