Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.93■□□□□ 0.94
NBPF3Q9H094 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NBPF3Q9H094 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.93■□□□□ 0.94
NBPF3Q9H094 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NBPF3Q9H094 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NBPF3Q9H094 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 FAM197Y8-203ENST00000450145 560 ntBASIC20.91■□□□□ 0.94
NBPF3Q9H094 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 PMS2P7-201ENST00000506558 1336 ntBASIC20.91■□□□□ 0.94
NBPF3Q9H094 RNPS1P1-201ENST00000507437 918 ntBASIC20.91■□□□□ 0.94
NBPF3Q9H094 POLD2P1-201ENST00000511220 997 ntBASIC20.91■□□□□ 0.94
NBPF3Q9H094 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.91■□□□□ 0.94
NBPF3Q9H094 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NBPF3Q9H094 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 AL031284.1-201ENST00000419297 478 ntBASIC20.9■□□□□ 0.94
NBPF3Q9H094 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 AC106730.1-201ENST00000566722 1090 ntBASIC20.9■□□□□ 0.94
NBPF3Q9H094 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 AP000867.4-201ENST00000641616 219 ntBASIC20.9■□□□□ 0.94
NBPF3Q9H094 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NBPF3Q9H094 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NBPF3Q9H094 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NBPF3Q9H094 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NBPF3Q9H094 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 AL353593.2-201ENST00000602529 1483 ntBASIC20.89■□□□□ 0.94
NBPF3Q9H094 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.89■□□□□ 0.94
NBPF3Q9H094 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NBPF3Q9H094 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NBPF3Q9H094 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms